Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8786 and 8787 are separated by 89 nucleotides8787 and 8788 are separated by 266 nucleotides8788 and 8789 are separated by 248 nucleotides8789 and 8790 are separated by 415 nucleotides mRNA_418: 8786 - KOG2308 Phosphatidic acid-preferring phospholipase A1, contains DDHD domain, at 976,232 to 979,073 8786 mRNA_419: 8787 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 979,163 to 981,247 8787 mRNA_420: 8788 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 981,514 to 982,786 8788 mRNA_421: 8789 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 983,035 to 984,157 8789 mRNA_422: 8790 - KOG0911 Glutaredoxin-related protein, at 984,573 to 985,710 8790
Group Condition mRNA_418 mRNA_419 mRNA_420 mRNA_421 mRNA_422
8786 8787 8788 8789 8790
auxotrophy Dropout Complete -0.0 -0.5 +0.0 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.0 +0.1 -0.8 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 +0.4 -0.3 N.D.
auxotrophy YNB Glucose -0.1 -0.3 -0.2 +0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 +0.4 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.1 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.0 -0.3 +0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 +0.1 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.2 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 +0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 +0.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 +0.5 +0.2 N.D.
growth on oleic acid YNB Glucose -0.3 +0.2 +0.3 +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.0 +0.2 +0.1 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.3 -0.0 +0.5 N.D.
growth on ypd YPD -0.1 -0.3 +0.7 +0.7 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.3 +0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.2 +0.2 +0.6 N.D.
remove
mRNA_418
plot
remove
mRNA_419
plot
remove
mRNA_420
remove
mRNA_421
plot
remove
mRNA_422
plot