Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8792 and 8793 are separated by 445 nucleotides8793 and 8794 are separated by 294 nucleotides8794 and 8795 are separated by 1216 nucleotides8795 and 8796 are separated by 108 nucleotides mRNA_424: 8792 - HMMPfam-Diaphanous GTPase-binding Domain-PF06371,SUPERFAMILY--SSF48371, at 987,368 to 990,699 8792 mRNA_425: 8793 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 991,145 to 992,451 8793 mRNA_426: 8794 - Hypothetical Protein, at 992,746 to 993,344 8794 mRNA_427: 8795 - Hypothetical Protein, at 994,561 to 995,537 8795 mRNA_428: 8796 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 995,646 to 996,920 8796
Group Condition mRNA_424 mRNA_425 mRNA_426 mRNA_427 mRNA_428
8792 8793 8794 8795 8796
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.2 +0.4 -1.3 -1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.5 -0.0 -0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.3 -0.1 -1.0 +0.6
auxotrophy Dropout Complete -0.4 +0.1 -0.1 -1.2 +0.7
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.0 +0.0 -0.7 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.6 -0.2 +1.0 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 +0.6 +0.2 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.2 +0.5 -0.3 +0.1
growth on ypd YPD +0.3 -0.6 +0.4 +0.3 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.5 -0.1 +0.8 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 -0.1 +0.3 +0.2
growth on oleic acid YNB Glucose -0.3 +0.7 +0.1 -0.4 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.3 +0.2 -0.0 +0.9
auxotrophy YNB Glucose -0.3 +0.0 -0.2 +0.7 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.2 +1.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.6 +0.1 +0.5 +0.1
growth on ricinoleic acid YNB Glucose -0.5 +0.1 +0.2 +1.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.5 +0.3 +1.0 +0.0
growth on oleic acid YNB Oleic Acid -0.2 +1.0 +0.2 +0.3 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.0 -0.0 +1.3 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.7 +0.2 +1.6 -0.0
remove
mRNA_424
plot
remove
mRNA_425
plot
remove
mRNA_426
remove
mRNA_427
plot
remove
mRNA_428
plot