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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8793 and 8794 are separated by 294 nucleotides
8794 and 8795 are separated by 1216 nucleotides
8795 and 8796 are separated by 108 nucleotides
8796 and 8797 are separated by 325 nucleotides
mRNA_425: 8793 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 991,145 to 992,451
8793
mRNA_426: 8794 - Hypothetical Protein, at 992,746 to 993,344
8794
mRNA_427: 8795 - Hypothetical Protein, at 994,561 to 995,537
8795
mRNA_428: 8796 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 995,646 to 996,920
8796
mRNA_429: 8797 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 997,246 to 998,562
8797
Group
Condition
mRNA
_425
mRNA
_426
mRNA
_427
mRNA
_428
mRNA
_429
8793
8794
8795
8796
8797
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.4
-1.3
-1.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.0
-0.4
-0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.1
-1.0
+0.6
N.D.
auxotrophy
Dropout Complete
+0.1
-0.1
-1.2
+0.7
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.0
-0.7
+0.2
N.D.
growth on ypd
YPD
-0.6
+0.4
+0.3
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.2
+1.0
-0.4
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.6
+0.2
-0.9
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.1
+0.8
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
+0.3
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.5
-0.3
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.2
-0.0
+0.9
N.D.
growth on oleic acid
YNB Glucose
+0.7
+0.1
-0.4
+0.4
N.D.
auxotrophy
YNB Glucose
+0.0
-0.2
+0.7
+0.4
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.2
+1.1
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.6
+0.1
+0.5
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
+0.2
+1.2
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.5
+0.3
+1.0
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.0
+1.3
+0.6
N.D.
growth on oleic acid
YNB Oleic Acid
+1.0
+0.2
+0.3
+0.6
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
+0.2
+1.6
-0.0
N.D.
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