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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8795 and 8796 are separated by 108 nucleotides
8796 and 8797 are separated by 325 nucleotides
8797 and 8798 are separated by 289 nucleotides
8798 and 8799 are separated by 394 nucleotides
mRNA_427: 8795 - Hypothetical Protein, at 994,561 to 995,537
8795
mRNA_428: 8796 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 995,646 to 996,920
8796
mRNA_429: 8797 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 997,246 to 998,562
8797
mRNA_430: 8798 - K13704 ABHD12 abhydrolase domain-containing protein 12, at 998,852 to 1,000,348
8798
mRNA_431: 8799 - HMMPfam-SH3-binding, glutamic acid-rich protein-PF04908,ProSiteProfiles-Glutaredoxin domain profile.-PS51354,SUPERFAMILY--SSF52833, at 1,000,743 to 1,002,192
8799
Group
Condition
mRNA
_427
mRNA
_428
mRNA
_429
mRNA
_430
mRNA
_431
8795
8796
8797
8798
8799
facs on lipid accumulation
Sorted High BODIPY Gate
-1.3
-1.3
N.D.
+0.3
+0.1
auxotrophy
Dropout Complete
-1.2
+0.7
N.D.
-0.5
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.9
N.D.
+0.2
-0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.2
N.D.
+0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.1
N.D.
+0.2
-0.8
growth on oleic acid
YNB Glucose
-0.4
+0.4
N.D.
-0.4
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.2
N.D.
-0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.7
+0.2
N.D.
+0.6
-0.0
growth on oleic acid
YNB Oleic Acid
+0.3
+0.6
N.D.
-0.6
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
+0.6
N.D.
+0.7
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.0
-0.4
N.D.
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.9
N.D.
-0.1
-0.2
auxotrophy
YNB Glucose
+0.7
+0.4
N.D.
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+1.1
+0.3
N.D.
-0.6
-0.0
growth on ricinoleic acid
YNB Glucose
+1.2
+0.2
N.D.
+0.1
-0.5
growth on ypd
YPD
+0.3
-0.5
N.D.
+0.8
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.8
+0.2
N.D.
+0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.5
+0.1
N.D.
+0.4
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+1.0
+0.0
N.D.
+0.6
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.6
-0.0
N.D.
+0.6
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.3
+0.6
N.D.
+0.3
-0.2
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