Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8795 and 8796 are separated by 108 nucleotides8796 and 8797 are separated by 325 nucleotides8797 and 8798 are separated by 289 nucleotides8798 and 8799 are separated by 394 nucleotides mRNA_427: 8795 - Hypothetical Protein, at 994,561 to 995,537 8795 mRNA_428: 8796 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 995,646 to 996,920 8796 mRNA_429: 8797 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 997,246 to 998,562 8797 mRNA_430: 8798 - K13704 ABHD12 abhydrolase domain-containing protein 12, at 998,852 to 1,000,348 8798 mRNA_431: 8799 - HMMPfam-SH3-binding, glutamic acid-rich protein-PF04908,ProSiteProfiles-Glutaredoxin domain profile.-PS51354,SUPERFAMILY--SSF52833, at 1,000,743 to 1,002,192 8799
Group Condition mRNA_427 mRNA_428 mRNA_429 mRNA_430 mRNA_431
8795 8796 8797 8798 8799
facs on lipid accumulation Sorted High BODIPY Gate -1.3 -1.3 N.D. +0.3 +0.1
auxotrophy Dropout Complete -1.2 +0.7 N.D. -0.5 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.9 N.D. +0.2 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 N.D. +0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 N.D. +0.2 -0.8
growth on oleic acid YNB Glucose -0.4 +0.4 N.D. -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 N.D. -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.7 +0.2 N.D. +0.6 -0.0
growth on oleic acid YNB Oleic Acid +0.3 +0.6 N.D. -0.6 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.6 N.D. +0.7 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.0 -0.4 N.D. +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.9 N.D. -0.1 -0.2
auxotrophy YNB Glucose +0.7 +0.4 N.D. -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +1.1 +0.3 N.D. -0.6 -0.0
growth on ricinoleic acid YNB Glucose +1.2 +0.2 N.D. +0.1 -0.5
growth on ypd YPD +0.3 -0.5 N.D. +0.8 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 +0.2 N.D. +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.1 N.D. +0.4 +0.3
ypd buoyancy 40 hrs Low Buoyancy +1.0 +0.0 N.D. +0.6 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +1.6 -0.0 N.D. +0.6 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.3 +0.6 N.D. +0.3 -0.2
remove
mRNA_427
plot
remove
mRNA_428
plot
remove
mRNA_429
remove
mRNA_430
plot
remove
mRNA_431
plot