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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8803 and 8804 are separated by 432 nucleotides
8804 and 8805 are separated by 851 nucleotides
8805 and 8806 are separated by 206 nucleotides
8806 and 8807 are separated by 306 nucleotides
mRNA_435: 8803 - K14845 RAI1, DOM3Z RAT1-interacting protein, at 1,008,072 to 1,010,135
8803
mRNA_436: 8804 - HMMPfam-CLASP N terminal-PF12348, at 1,010,568 to 1,012,798
8804
mRNA_437: 8805 - Hypothetical Protein, at 1,013,650 to 1,014,960
8805
mRNA_438: 8806 - Hypothetical Protein, at 1,015,167 to 1,016,657
8806
mRNA_439: 8807 - KOG2246 Galactosyltransferases, at 1,016,964 to 1,019,320
8807
Group
Condition
mRNA
_435
mRNA
_436
mRNA
_437
mRNA
_438
mRNA
_439
8803
8804
8805
8806
8807
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
+0.7
-1.8
-0.5
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
-0.8
-0.7
+0.1
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.4
-1.0
-0.3
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
-0.2
-0.4
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
-0.6
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.3
-0.0
-0.3
+0.0
growth on ypd
YPD
-0.8
-0.1
+0.2
+0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
-0.1
-0.5
+0.5
growth on oleic acid
YNB Glucose
+0.2
+0.1
+0.1
-0.6
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.2
+0.0
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.4
-0.1
-0.2
+0.1
auxotrophy
Dropout Complete
+0.1
-0.0
+0.6
-0.4
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.5
-0.2
+0.4
-0.2
+0.2
growth on oleic acid
YNB Oleic Acid
+0.3
+0.5
-0.0
-0.5
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.4
-0.4
+0.1
+0.3
auxotrophy
YNB Glucose
+0.4
+0.1
+0.5
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
+0.1
-0.1
+0.4
-0.1
growth on ricinoleic acid
YNB Glucose
+0.5
+0.4
-0.1
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
-0.2
+0.2
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.4
+0.7
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
+0.3
+0.3
+0.3
+0.1
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