Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8804 and 8805 are separated by 851 nucleotides8805 and 8806 are separated by 206 nucleotides8806 and 8807 are separated by 306 nucleotides8807 and 8808 are separated by 892 nucleotides mRNA_436: 8804 - HMMPfam-CLASP N terminal-PF12348, at 1,010,568 to 1,012,798 8804 mRNA_437: 8805 - Hypothetical Protein, at 1,013,650 to 1,014,960 8805 mRNA_438: 8806 - Hypothetical Protein, at 1,015,167 to 1,016,657 8806 mRNA_439: 8807 - KOG2246 Galactosyltransferases, at 1,016,964 to 1,019,320 8807 mRNA_440: 8808 - HMMPfam-G protein-coupled glucose receptor regulating Gpa2-PF11710,SUPERFAMILY--SSF81321, at 1,020,213 to 1,022,062 8808
Group Condition mRNA_436 mRNA_437 mRNA_438 mRNA_439 mRNA_440
8804 8805 8806 8807 8808
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 -1.8 -0.5 -0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -1.0 -0.3 +0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.7 +0.1 +0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.6 -0.2 +0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0 -0.3 +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.4 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 -0.5 +0.5 -0.0
growth on oleic acid YNB Glucose +0.1 +0.1 -0.6 +0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.1 -0.2 +0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.0 -0.1 +0.1 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.4 +0.1 +0.3 -0.1
growth on ypd YPD -0.1 +0.2 +0.4 -0.1 +0.0
growth on ricinoleic acid YNB Glucose +0.4 -0.1 +0.0 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 +0.4 -0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.5 -0.0 -0.5 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 +0.2 +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 -0.2 +0.2 +0.6
auxotrophy YNB Glucose +0.1 +0.5 -0.2 -0.0 +0.6
auxotrophy Dropout Complete -0.0 +0.6 -0.4 +0.3 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.3 +0.3 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.7 +0.1 -0.0 +0.3
remove
mRNA_436
plot
remove
mRNA_437
plot
remove
mRNA_438
remove
mRNA_439
plot
remove
mRNA_440
plot