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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8805 and 8806 are separated by 206 nucleotides
8806 and 8807 are separated by 306 nucleotides
8807 and 8808 are separated by 892 nucleotides
8808 and 8809 are separated by 761 nucleotides
mRNA_437: 8805 - Hypothetical Protein, at 1,013,650 to 1,014,960
8805
mRNA_438: 8806 - Hypothetical Protein, at 1,015,167 to 1,016,657
8806
mRNA_439: 8807 - KOG2246 Galactosyltransferases, at 1,016,964 to 1,019,320
8807
mRNA_440: 8808 - HMMPfam-G protein-coupled glucose receptor regulating Gpa2-PF11710,SUPERFAMILY--SSF81321, at 1,020,213 to 1,022,062
8808
mRNA_441: 8809 - K13989 DERL2_3 Derlin-2/3, at 1,022,824 to 1,024,299
8809
Group
Condition
mRNA
_437
mRNA
_438
mRNA
_439
mRNA
_440
mRNA
_441
8805
8806
8807
8808
8809
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.8
-0.5
-0.0
+0.0
-0.8
growth on oleic acid
YNB Glucose
+0.1
-0.6
+0.2
+0.0
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.1
+0.3
-0.1
-1.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.5
+0.5
-0.0
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
-0.3
+0.4
-0.3
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.3
+0.0
+0.0
-0.4
growth on ricinoleic acid
YNB Glucose
-0.1
+0.0
+0.0
+0.2
-0.8
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
+0.1
+0.5
-1.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
+0.1
-0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.4
+0.1
+0.2
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.2
+0.0
-0.3
+0.9
growth on oleic acid
YNB Oleic Acid
-0.0
-0.5
+0.4
+0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.1
+0.4
-0.2
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.2
+0.2
+0.6
-1.0
auxotrophy
YNB Glucose
+0.5
-0.2
-0.0
+0.6
-0.7
auxotrophy
Dropout Complete
+0.6
-0.4
+0.3
+0.7
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.2
+0.2
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.4
-0.1
+0.2
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
+0.1
-0.0
+0.3
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.3
+0.1
+0.4
+0.7
growth on ypd
YPD
+0.2
+0.4
-0.1
+0.0
+1.9
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