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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8806 and 8807 are separated by 306 nucleotides
8807 and 8808 are separated by 892 nucleotides
8808 and 8809 are separated by 761 nucleotides
8809 and 8810 are separated by 279 nucleotides
mRNA_438: 8806 - Hypothetical Protein, at 1,015,167 to 1,016,657
8806
mRNA_439: 8807 - KOG2246 Galactosyltransferases, at 1,016,964 to 1,019,320
8807
mRNA_440: 8808 - HMMPfam-G protein-coupled glucose receptor regulating Gpa2-PF11710,SUPERFAMILY--SSF81321, at 1,020,213 to 1,022,062
8808
mRNA_441: 8809 - K13989 DERL2_3 Derlin-2/3, at 1,022,824 to 1,024,299
8809
mRNA_442: 8810 - K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15, at 1,024,579 to 1,029,147
8810
Group
Condition
mRNA
_438
mRNA
_439
mRNA
_440
mRNA
_441
mRNA
_442
8806
8807
8808
8809
8810
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.0
+0.0
-0.8
-1.0
growth on oleic acid
YNB Glucose
-0.6
+0.2
+0.0
-0.8
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.5
+0.5
-0.0
-0.7
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.0
+0.0
-0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.1
-0.0
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.3
-0.1
-1.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.1
+0.5
-1.2
+0.3
growth on ricinoleic acid
YNB Glucose
+0.0
+0.0
+0.2
-0.8
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.0
-0.3
+0.9
-0.7
auxotrophy
YNB Glucose
-0.2
-0.0
+0.6
-0.7
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.1
+0.2
+0.0
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.2
+0.6
-1.0
+0.3
growth on oleic acid
YNB Oleic Acid
-0.5
+0.4
+0.2
-0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.4
-0.3
+0.4
-0.1
auxotrophy
Dropout Complete
-0.4
+0.3
+0.7
-0.6
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.4
-0.2
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.0
+0.3
+0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.1
+0.2
+0.6
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.1
+0.4
+0.7
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.2
+0.2
+0.1
+0.5
growth on ypd
YPD
+0.4
-0.1
+0.0
+1.9
+0.2
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