Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8808 and 8809 are separated by 761 nucleotides8809 and 8810 are separated by 279 nucleotides8810 and 8811 are separated by 225 nucleotides8811 and 8812 are separated by 335 nucleotides mRNA_440: 8808 - HMMPfam-G protein-coupled glucose receptor regulating Gpa2-PF11710,SUPERFAMILY--SSF81321, at 1,020,213 to 1,022,062 8808 mRNA_441: 8809 - K13989 DERL2_3 Derlin-2/3, at 1,022,824 to 1,024,299 8809 mRNA_442: 8810 - K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15, at 1,024,579 to 1,029,147 8810 mRNA_443: 8811 - KOG2742 Predicted oxidoreductase, at 1,029,373 to 1,030,485 8811 mRNA_444: 8812 - HMMPfam-Transcription factor IIIC subunit delta N-term-PF12657,HMMPfam-Putative zinc-finger of transcription factor IIIC complex-PF12660,SUPERFAMILY--SSF50978, at 1,030,821 to 1,034,414 8812
Group Condition mRNA_440 mRNA_441 mRNA_442 mRNA_443 mRNA_444
8808 8809 8810 8811 8812
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.8 -1.0 +0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.7 +0.0 -0.1 -0.3
growth on oleic acid YNB Glucose +0.0 -0.8 +0.0 +0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.4 -0.0 -0.5 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.9 -0.7 +0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.4 -0.0 +0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.4 -0.1 +0.3 -0.2
growth on oleic acid YNB Oleic Acid +0.2 -0.2 +0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.1 +0.5 -0.3 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.0 +0.0 +0.6 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.6 -0.3 +0.2 +0.0
growth on ricinoleic acid YNB Glucose +0.2 -0.8 +0.2 +1.0 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.5 -1.2 +0.3 +1.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.3 -0.0 +0.7 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -1.0 +0.2 +1.5 +0.6
auxotrophy Dropout Complete +0.7 -0.6 +0.2 +1.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.7 -0.4 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.5 -0.0 +0.5 +0.3
auxotrophy YNB Glucose +0.6 -0.7 +0.3 +1.1 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.6 -1.0 +0.3 +1.5 +0.5
growth on ypd YPD +0.0 +1.9 +0.2 -0.2 +0.5
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