Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8810 and 8811 are separated by 225 nucleotides8811 and 8812 are separated by 335 nucleotides8812 and 8813 are separated by 279 nucleotides8813 and 8814 are separated by 856 nucleotides mRNA_442: 8810 - K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15, at 1,024,579 to 1,029,147 8810 mRNA_443: 8811 - KOG2742 Predicted oxidoreductase, at 1,029,373 to 1,030,485 8811 mRNA_444: 8812 - HMMPfam-Transcription factor IIIC subunit delta N-term-PF12657,HMMPfam-Putative zinc-finger of transcription factor IIIC complex-PF12660,SUPERFAMILY--SSF50978, at 1,030,821 to 1,034,414 8812 mRNA_445: 8813 - K03768 PPIB, ppiB peptidyl-prolyl cis-trans isomerase B (cyclophilin B), at 1,034,694 to 1,036,039 8813 mRNA_446: 8814 - K00254 DHODH, pyrD dihydroorotate dehydrogenase, at 1,036,896 to 1,038,649 8814
Group Condition mRNA_442 mRNA_443 mRNA_444 mRNA_445 mRNA_446
8810 8811 8812 8813 8814
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.5 -0.1 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.7 +0.4 -0.3 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +0.1 +0.4 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.2 +0.0 +0.2 N.D.
growth on oleic acid YNB Glucose +0.0 +0.3 -0.2 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.3 -0.2 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.4 -0.1 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.2 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.6 -0.3 +0.3 N.D.
auxotrophy Dropout Complete +0.2 +1.0 -0.1 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.3 +0.0 +0.6 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +1.0 +0.3 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.2 +0.4 +0.9 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.7 +0.7 -0.4 N.D.
growth on ypd YPD +0.2 -0.2 +0.5 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.5 +0.3 +0.5 N.D.
auxotrophy YNB Glucose +0.3 +1.1 +0.5 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 +1.4 +0.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 +1.5 +0.5 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +1.5 +0.6 +0.1 N.D.
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