Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8811 and 8812 are separated by 335 nucleotides8812 and 8813 are separated by 279 nucleotides8813 and 8814 are separated by 856 nucleotides8814 and 8815 are separated by 1322 nucleotides mRNA_443: 8811 - KOG2742 Predicted oxidoreductase, at 1,029,373 to 1,030,485 8811 mRNA_444: 8812 - HMMPfam-Transcription factor IIIC subunit delta N-term-PF12657,HMMPfam-Putative zinc-finger of transcription factor IIIC complex-PF12660,SUPERFAMILY--SSF50978, at 1,030,821 to 1,034,414 8812 mRNA_445: 8813 - K03768 PPIB, ppiB peptidyl-prolyl cis-trans isomerase B (cyclophilin B), at 1,034,694 to 1,036,039 8813 mRNA_446: 8814 - K00254 DHODH, pyrD dihydroorotate dehydrogenase, at 1,036,896 to 1,038,649 8814 mRNA_447: 8815 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 1,039,972 to 1,042,565 8815
Group Condition mRNA_443 mRNA_444 mRNA_445 mRNA_446 mRNA_447
8811 8812 8813 8814 8815
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.1 -0.4 N.D. -1.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 -0.1 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.3 -0.0 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 +0.6 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 +0.3 N.D. -0.2
growth on oleic acid YNB Glucose +0.3 -0.2 +0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.0 +0.2 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.1 +0.2 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 -0.2 N.D. +0.5
auxotrophy Dropout Complete +1.0 -0.1 -0.4 N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.6 -0.3 +0.3 N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.1 +0.2 +0.1 N.D. +0.5
growth on ypd YPD -0.2 +0.5 +0.6 N.D. +0.0
growth on ricinoleic acid YNB Glucose +1.0 +0.3 -0.6 N.D. +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.3 +0.5 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +1.4 +0.1 -0.1 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.4 +0.9 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 +0.7 -0.4 N.D. +0.7
auxotrophy YNB Glucose +1.1 +0.5 -0.3 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine +1.5 +0.5 -0.2 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +1.5 +0.6 +0.1 N.D. +1.1
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