Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8823 and 8824 are separated by 1329 nucleotides8824 and 8825 are separated by 461 nucleotides8825 and 8826 are separated by 309 nucleotides8826 and 8827 are separated by 80 nucleotides mRNA_455: 8823 - KOG1745 Histones H3 and H4, at 1,060,190 to 1,060,901 8823 mRNA_456: 8824 - Hypothetical Protein, at 1,062,231 to 1,064,186 8824 mRNA_457: 8825 - K14963 WDR5, SWD3, CPS30 COMPASS component SWD3, at 1,064,648 to 1,065,964 8825 mRNA_458: 8826 - KOG2676 Uncharacterized conserved protein, at 1,066,274 to 1,068,450 8826 mRNA_459: 8827 - K10598 PPIL2, CYC4, CHP60 peptidyl-prolyl cis-trans isomerase-like 2, at 1,068,531 to 1,071,036 8827
Group Condition mRNA_455 mRNA_456 mRNA_457 mRNA_458 mRNA_459
8823 8824 8825 8826 8827
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.3 N.D. N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.5 N.D. N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.1 N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.4 N.D. N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.3 N.D. N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.1 N.D. N.D. -0.2
growth on ypd YPD -0.1 -0.4 N.D. N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.2 N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 N.D. N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.5 N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 N.D. N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 N.D. N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.6 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.0 N.D. N.D. +0.1
auxotrophy Dropout Complete +0.1 +0.4 N.D. N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.4 N.D. N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.3 N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.4 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.4 N.D. N.D. +0.4
auxotrophy YNB Glucose +0.5 +0.2 N.D. N.D. +0.1
growth on oleic acid YNB Glucose +0.3 +0.4 N.D. N.D. +0.2
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