Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8824 and 8825 are separated by 461 nucleotides8825 and 8826 are separated by 309 nucleotides8826 and 8827 are separated by 80 nucleotides8827 and 8828 are separated by 262 nucleotides mRNA_456: 8824 - Hypothetical Protein, at 1,062,231 to 1,064,186 8824 mRNA_457: 8825 - K14963 WDR5, SWD3, CPS30 COMPASS component SWD3, at 1,064,648 to 1,065,964 8825 mRNA_458: 8826 - KOG2676 Uncharacterized conserved protein, at 1,066,274 to 1,068,450 8826 mRNA_459: 8827 - K10598 PPIL2, CYC4, CHP60 peptidyl-prolyl cis-trans isomerase-like 2, at 1,068,531 to 1,071,036 8827 mRNA_460: 8828 - K15177 LEO1 RNA polymerase-associated protein LEO1, at 1,071,299 to 1,073,173 8828
Group Condition mRNA_456 mRNA_457 mRNA_458 mRNA_459 mRNA_460
8824 8825 8826 8827 8828
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. N.D. -0.6 -2.6
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. -0.2 -1.3
growth on ypd YPD -0.4 N.D. N.D. -0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.6 N.D. N.D. -0.4 -0.8
growth on ricinoleic acid YNB Glucose -0.5 N.D. N.D. -0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. N.D. -0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. N.D. +0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. N.D. -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. N.D. -0.6 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. N.D. -0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.4 N.D. N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. N.D. -0.5 +1.1
auxotrophy YNB Glucose +0.2 N.D. N.D. +0.1 +0.1
auxotrophy Dropout Complete +0.4 N.D. N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. N.D. -0.3 +1.0
growth on oleic acid YNB Glucose +0.4 N.D. N.D. +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. N.D. -0.0 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. N.D. +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. N.D. +0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. N.D. +0.0 +1.0
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