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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8826 and 8827 are separated by 80 nucleotides
8827 and 8828 are separated by 262 nucleotides
8828 and 8829 are separated by 167 nucleotides
8829 and 8830 are separated by 505 nucleotides
mRNA_458: 8826 - KOG2676 Uncharacterized conserved protein, at 1,066,274 to 1,068,450
8826
mRNA_459: 8827 - K10598 PPIL2, CYC4, CHP60 peptidyl-prolyl cis-trans isomerase-like 2, at 1,068,531 to 1,071,036
8827
mRNA_460: 8828 - K15177 LEO1 RNA polymerase-associated protein LEO1, at 1,071,299 to 1,073,173
8828
mRNA_461: 8829 - Hypothetical Protein, at 1,073,341 to 1,074,099
8829
mRNA_462: 8830 - Hypothetical Protein, at 1,074,605 to 1,075,532
8830
Group
Condition
mRNA
_458
mRNA
_459
mRNA
_460
mRNA
_461
mRNA
_462
8826
8827
8828
8829
8830
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.6
-2.6
+0.5
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.4
-0.8
+0.3
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
-1.3
+0.9
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.6
+0.4
+0.0
-0.7
growth on ypd
YPD
N.D.
-0.0
-0.6
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.0
+0.1
-0.4
-0.3
growth on oleic acid
YNB Glucose
N.D.
+0.2
-0.1
+0.2
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.1
-0.1
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
+0.2
+0.1
-0.0
auxotrophy
Dropout Complete
N.D.
-0.0
+0.1
+0.1
-0.0
auxotrophy
YNB Glucose
N.D.
+0.1
+0.1
-0.2
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.3
+0.5
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
+0.6
-0.2
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
+0.3
+0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.3
+0.8
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
+0.3
+0.3
+0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.4
+0.1
+0.2
+0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.0
+1.0
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.5
+1.1
+0.6
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
+1.0
+0.4
+0.2
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