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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8831 and 8832 are separated by 311 nucleotides
8832 and 8833 are separated by 72 nucleotides
8833 and 8834 are separated by 332 nucleotides
8834 and 8835 are separated by 326 nucleotides
mRNA_463: 8831 - Hypothetical Protein, at 1,076,086 to 1,077,358
8831
mRNA_464: 8832 - Hypothetical Protein, at 1,077,670 to 1,079,089
8832
mRNA_465: 8833 - K10858 PMS2 DNA mismatch repair protein PMS2, at 1,079,162 to 1,083,033
8833
mRNA_466: 8834 - Hypothetical Protein, at 1,083,366 to 1,084,523
8834
mRNA_467: 8835 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 1,084,850 to 1,086,342
8835
Group
Condition
mRNA
_463
mRNA
_464
mRNA
_465
mRNA
_466
mRNA
_467
8831
8832
8833
8834
8835
ypd buoyancy
40 hrs No Buoyancy Separation
-2.1
-0.2
+0.1
-0.6
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
+0.1
+0.1
-0.5
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.0
+0.2
-0.1
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.2
-0.5
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.2
-0.1
-0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
-0.4
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
+0.1
-0.2
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.7
+0.3
-0.2
+0.2
N.D.
growth on ypd
YPD
-0.7
+0.2
+0.0
+0.0
N.D.
auxotrophy
Dropout Complete
-0.3
+0.1
-0.2
-0.0
N.D.
auxotrophy
YNB Glucose
-0.5
+0.4
-0.2
-0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.3
+0.0
-0.1
N.D.
growth on oleic acid
YNB Glucose
-0.1
+0.1
-0.1
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
+0.2
-0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.5
-0.2
+0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.3
+0.1
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.5
-0.2
-0.1
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
+0.4
-0.3
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
-0.2
+0.1
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.5
+0.1
+0.0
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.9
+0.2
+0.1
-0.1
N.D.
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