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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8832 and 8833 are separated by 72 nucleotides
8833 and 8834 are separated by 332 nucleotides
8834 and 8835 are separated by 326 nucleotides
8835 and 8836 are separated by 81 nucleotides
mRNA_464: 8832 - Hypothetical Protein, at 1,077,670 to 1,079,089
8832
mRNA_465: 8833 - K10858 PMS2 DNA mismatch repair protein PMS2, at 1,079,162 to 1,083,033
8833
mRNA_466: 8834 - Hypothetical Protein, at 1,083,366 to 1,084,523
8834
mRNA_467: 8835 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 1,084,850 to 1,086,342
8835
mRNA_468: 8836 - Hypothetical Protein, at 1,086,424 to 1,087,519
8836
Group
Condition
mRNA
_464
mRNA
_465
mRNA
_466
mRNA
_467
mRNA
_468
8832
8833
8834
8835
8836
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.2
-0.2
N.D.
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.1
-0.6
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.1
-0.1
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.5
-0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.1
-0.1
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.1
+0.1
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.1
-0.5
N.D.
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
-0.0
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.1
-0.3
N.D.
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
-0.2
N.D.
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.4
+0.1
N.D.
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
+0.2
N.D.
+0.1
auxotrophy
Dropout Complete
+0.1
-0.2
-0.0
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.2
+0.2
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
-0.2
N.D.
+0.5
auxotrophy
YNB Glucose
+0.4
-0.2
-0.0
N.D.
+0.1
growth on oleic acid
YNB Glucose
+0.1
-0.1
-0.2
N.D.
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
+0.3
N.D.
-0.0
growth on ricinoleic acid
YNB Glucose
+0.4
-0.3
+0.0
N.D.
+0.3
growth on ypd
YPD
+0.2
+0.0
+0.0
N.D.
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.0
-0.1
N.D.
+0.5
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