Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8834 and 8835 are separated by 326 nucleotides
8835 and 8836 are separated by 81 nucleotides
8836 and 8837 are separated by 846 nucleotides
8837 and 8838 are separated by 457 nucleotides
mRNA_466: 8834 - Hypothetical Protein, at 1,083,366 to 1,084,523
8834
mRNA_467: 8835 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 1,084,850 to 1,086,342
8835
mRNA_468: 8836 - Hypothetical Protein, at 1,086,424 to 1,087,519
8836
mRNA_469: 8837 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1,088,366 to 1,093,699
8837
mRNA_470: 8838 - KOG0714 Molecular chaperone (DnaJ superfamily), at 1,094,157 to 1,095,851
8838
Group
Condition
mRNA
_466
mRNA
_467
mRNA
_468
mRNA
_469
mRNA
_470
8834
8835
8836
8837
8838
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
N.D.
+0.2
-1.5
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
+0.5
-1.6
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
-0.3
-0.4
-0.4
auxotrophy
YNB Glucose
-0.0
N.D.
+0.1
-1.4
+0.1
auxotrophy
Dropout Complete
-0.0
N.D.
+0.2
-1.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
+0.0
-1.5
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
-0.2
-0.7
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
N.D.
+0.2
+0.1
-0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.2
N.D.
+0.3
-1.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
-0.5
+0.0
-0.3
growth on ricinoleic acid
YNB Glucose
+0.0
N.D.
+0.3
-1.0
-0.1
growth on ypd
YPD
+0.0
N.D.
+0.3
-0.9
-0.0
growth on oleic acid
YNB Oleic Acid
-0.2
N.D.
+0.5
-0.8
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
-0.3
-0.3
+0.5
growth on oleic acid
YNB Glucose
-0.2
N.D.
+0.4
-0.5
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
+0.1
-0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
+0.4
+0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
+0.3
N.D.
-0.0
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
+0.1
-0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
+0.4
-0.5
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
N.D.
+0.3
+0.9
+0.5
remove
mRNA_466
plot
remove
mRNA_467
plot
remove
mRNA_468
remove
mRNA_469
plot
remove
mRNA_470
plot