Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8834 and 8835 are separated by 326 nucleotides8835 and 8836 are separated by 81 nucleotides8836 and 8837 are separated by 846 nucleotides8837 and 8838 are separated by 457 nucleotides mRNA_466: 8834 - Hypothetical Protein, at 1,083,366 to 1,084,523 8834 mRNA_467: 8835 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 1,084,850 to 1,086,342 8835 mRNA_468: 8836 - Hypothetical Protein, at 1,086,424 to 1,087,519 8836 mRNA_469: 8837 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1,088,366 to 1,093,699 8837 mRNA_470: 8838 - KOG0714 Molecular chaperone (DnaJ superfamily), at 1,094,157 to 1,095,851 8838
Group Condition mRNA_466 mRNA_467 mRNA_468 mRNA_469 mRNA_470
8834 8835 8836 8837 8838
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. +0.2 -1.5 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.5 -1.6 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.3 -0.4 -0.4
auxotrophy YNB Glucose -0.0 N.D. +0.1 -1.4 +0.1
auxotrophy Dropout Complete -0.0 N.D. +0.2 -1.4 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.0 -1.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.2 -0.7 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. +0.2 +0.1 -0.9
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.3 -1.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.5 +0.0 -0.3
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.3 -1.0 -0.1
growth on ypd YPD +0.0 N.D. +0.3 -0.9 -0.0
growth on oleic acid YNB Oleic Acid -0.2 N.D. +0.5 -0.8 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.3 -0.3 +0.5
growth on oleic acid YNB Glucose -0.2 N.D. +0.4 -0.5 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.1 -0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.4 +0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.0 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. +0.1 -0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. +0.4 -0.5 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. +0.3 +0.9 +0.5
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