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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8835 and 8836 are separated by 81 nucleotides
8836 and 8837 are separated by 846 nucleotides
8837 and 8838 are separated by 457 nucleotides
8838 and 8839 are separated by 331 nucleotides
mRNA_467: 8835 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 1,084,850 to 1,086,342
8835
mRNA_468: 8836 - Hypothetical Protein, at 1,086,424 to 1,087,519
8836
mRNA_469: 8837 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1,088,366 to 1,093,699
8837
mRNA_470: 8838 - KOG0714 Molecular chaperone (DnaJ superfamily), at 1,094,157 to 1,095,851
8838
mRNA_471: 8839 - Hypothetical Protein, at 1,096,183 to 1,097,842
8839
Group
Condition
mRNA
_467
mRNA
_468
mRNA
_469
mRNA
_470
mRNA
_471
8835
8836
8837
8838
8839
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
-1.5
-0.2
-0.6
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.0
-1.5
+0.0
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.5
-1.6
-0.2
-0.2
auxotrophy
Dropout Complete
N.D.
+0.2
-1.4
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.7
-0.3
+0.0
auxotrophy
YNB Glucose
N.D.
+0.1
-1.4
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
-1.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
-0.4
-0.4
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
+0.3
-1.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.5
+0.0
-0.3
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
+0.1
-0.9
-0.0
growth on ypd
YPD
N.D.
+0.3
-0.9
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.3
-0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
-0.1
-0.2
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.5
-0.8
+0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.4
+0.1
-0.5
+0.1
growth on oleic acid
YNB Glucose
N.D.
+0.4
-0.5
-0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.1
-0.0
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.4
-0.5
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
-0.3
+0.5
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.3
+0.9
+0.5
+0.2
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