Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8837 and 8838 are separated by 457 nucleotides
8838 and 8839 are separated by 331 nucleotides
8839 and 8840 are separated by 48 nucleotides
8840 and 8841 are separated by 237 nucleotides
mRNA_469: 8837 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1,088,366 to 1,093,699
8837
mRNA_470: 8838 - KOG0714 Molecular chaperone (DnaJ superfamily), at 1,094,157 to 1,095,851
8838
mRNA_471: 8839 - Hypothetical Protein, at 1,096,183 to 1,097,842
8839
mRNA_472: 8840 - KOG0987 DNA helicase PIF1/RRM3, at 1,097,891 to 1,099,308
8840
mRNA_473: 8841 - K15255 PIF1 ATP-dependent DNA helicase PIF1, at 1,099,546 to 1,101,190
8841
Group
Condition
mRNA
_469
mRNA
_470
mRNA
_471
mRNA
_472
mRNA
_473
8837
8838
8839
8840
8841
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.5
-0.2
-0.6
N.D.
-0.0
auxotrophy
Dropout Complete
-1.4
-0.1
-0.2
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-1.5
+0.0
-0.3
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.6
-0.2
-0.2
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.3
+0.0
N.D.
-0.4
auxotrophy
YNB Glucose
-1.4
+0.1
+0.2
N.D.
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.9
-0.0
N.D.
-0.6
auxotrophy
YNB Glucose 75mM Arginine
-1.1
+0.1
-0.3
N.D.
+0.0
growth on ricinoleic acid
YNB Glucose
-1.0
-0.1
-0.1
N.D.
+0.2
growth on ypd
YPD
-0.9
-0.0
+0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.4
+0.2
N.D.
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.5
+0.1
N.D.
-0.2
growth on oleic acid
YNB Oleic Acid
-0.8
+0.2
+0.2
N.D.
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
+0.4
+0.1
N.D.
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.0
-0.2
N.D.
+0.2
growth on oleic acid
YNB Glucose
-0.5
-0.0
+0.2
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.3
+0.2
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
+0.1
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
+0.3
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.5
+0.7
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.9
+0.5
+0.2
N.D.
-0.0
remove
mRNA_469
plot
remove
mRNA_470
plot
remove
mRNA_471
remove
mRNA_472
plot
remove
mRNA_473
plot