Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8839 and 8840 are separated by 48 nucleotides8840 and 8841 are separated by 237 nucleotides8841 and 8842 are separated by 714 nucleotides8842 and 8843 are separated by 366 nucleotides mRNA_471: 8839 - Hypothetical Protein, at 1,096,183 to 1,097,842 8839 mRNA_472: 8840 - KOG0987 DNA helicase PIF1/RRM3, at 1,097,891 to 1,099,308 8840 mRNA_473: 8841 - K15255 PIF1 ATP-dependent DNA helicase PIF1, at 1,099,546 to 1,101,190 8841 mRNA_474: 8842 - Hypothetical Protein, at 1,101,905 to 1,103,305 8842 mRNA_475: 8843 - K15153 MED31, SOH1 mediator of RNA polymerase II transcription subunit 31, at 1,103,672 to 1,105,927 8843
Group Condition mRNA_471 mRNA_472 mRNA_473 mRNA_474 mRNA_475
8839 8840 8841 8842 8843
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. -0.4 -0.7 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. -0.6 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -0.5 -0.3 +0.0
auxotrophy Dropout Complete -0.2 N.D. -0.4 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.2 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.0 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.0 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. -0.0 +0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.0 +0.1 +0.0
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.0 -0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.0 +0.1 -0.2
growth on ypd YPD +0.1 N.D. +0.2 -0.1 -0.1
growth on oleic acid YNB Glucose +0.2 N.D. +0.0 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.1 +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.2 +0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.2 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.2 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 N.D. -0.1 -0.4 +0.2
auxotrophy YNB Glucose +0.2 N.D. -0.2 +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. +0.2 +0.8 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.5 +0.5 +0.0
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