Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8846 and 8847 are separated by 644 nucleotides8847 and 8848 are separated by 527 nucleotides8848 and 8849 are separated by 249 nucleotides8849 and 8850 are separated by 21985 nucleotides mRNA_478: 8846 - HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,111,046 to 1,113,487 8846 mRNA_479: 8847 - K17302 COPB2, SEC27 coatomer subunit beta', at 1,114,132 to 1,117,214 8847 mRNA_480: 8848 - ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689, at 1,117,742 to 1,121,401 8848 mRNA_481: 8849 - K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2, at 1,121,651 to 1,124,733 8849 mRNA_482: 8850 - Hypothetical Protein, at 1,146,719 to 1,146,997 8850
Group Condition mRNA_478 mRNA_479 mRNA_480 mRNA_481 mRNA_482
8846 8847 8848 8849 8850
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. -0.4 -0.7 -0.2
growth on ypd YPD -0.2 N.D. +0.1 -1.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +0.4 -1.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.2 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.2 -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.0 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.1 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. -0.3 -0.6 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.4 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.5 -0.7 +0.2
auxotrophy Dropout Complete +0.0 N.D. +0.5 -0.6 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. +0.0 -0.5 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. -0.2 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.4 -0.3 -0.1
growth on ricinoleic acid YNB Glucose +0.4 N.D. -0.1 -0.3 +0.2
auxotrophy YNB Glucose +0.0 N.D. +0.6 -0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. +0.5 -0.2 -0.0
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.2 +0.1 +0.5
growth on oleic acid YNB Glucose +0.4 N.D. +0.3 +0.3 +0.5
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