Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8847 and 8848 are separated by 527 nucleotides8848 and 8849 are separated by 249 nucleotides8849 and 8850 are separated by 21985 nucleotides8850 and 8851 are separated by 3106 nucleotides mRNA_479: 8847 - K17302 COPB2, SEC27 coatomer subunit beta', at 1,114,132 to 1,117,214 8847 mRNA_480: 8848 - ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689, at 1,117,742 to 1,121,401 8848 mRNA_481: 8849 - K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2, at 1,121,651 to 1,124,733 8849 mRNA_482: 8850 - Hypothetical Protein, at 1,146,719 to 1,146,997 8850 mRNA_483: 8851 - KOG1339 Aspartyl protease, at 1,150,104 to 1,151,338 8851
Group Condition mRNA_479 mRNA_480 mRNA_481 mRNA_482 mRNA_483
8847 8848 8849 8850 8851
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 -0.7 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 -0.5 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 -0.2 -0.0 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 -1.3 -0.2 -0.1
growth on ypd YPD N.D. +0.1 -1.3 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 -0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.3 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 -0.0 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.1 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 -0.5 +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 -0.7 +0.2 +0.0
auxotrophy Dropout Complete N.D. +0.5 -0.6 +0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 -0.3 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 -0.6 +0.3 +1.0
growth on ricinoleic acid YNB Glucose N.D. -0.1 -0.3 +0.2 +0.7
auxotrophy YNB Glucose N.D. +0.6 -0.4 +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.5 -0.2 -0.0 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 -0.1 +0.1 +0.8
growth on oleic acid YNB Oleic Acid N.D. +0.2 +0.1 +0.5 +0.1
growth on oleic acid YNB Glucose N.D. +0.3 +0.3 +0.5 -0.1
remove
mRNA_479
plot
remove
mRNA_480
plot
remove
mRNA_481
remove
mRNA_482
plot
remove
mRNA_483
plot