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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8850 and 8851 are separated by 3106 nucleotides
8851 and 8852 are separated by 638 nucleotides
8852 and 8853 are separated by 412 nucleotides
8853 and 8854 are separated by 190 nucleotides
mRNA_482: 8850 - Hypothetical Protein, at 1,146,719 to 1,146,997
8850
mRNA_483: 8851 - KOG1339 Aspartyl protease, at 1,150,104 to 1,151,338
8851
mRNA_484: 8852 - Hypothetical Protein, at 1,151,977 to 1,154,074
8852
mRNA_485: 8853 - K13278 ASPG 60kDa lysophospholipase, at 1,154,487 to 1,156,857
8853
mRNA_486: 8854 - HMMPfam-Domain of unknown function (DUF202)-PF02656, at 1,157,048 to 1,157,778
8854
Group
Condition
mRNA
_482
mRNA
_483
mRNA
_484
mRNA
_485
mRNA
_486
8850
8851
8852
8853
8854
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.8
-0.3
-0.1
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.4
-0.1
-0.0
-1.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.3
-0.0
-0.1
-1.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
+0.1
-0.0
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.1
-0.1
+0.1
-0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.1
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.3
+0.0
+0.4
-1.0
growth on ypd
YPD
+0.1
-0.1
+0.2
+0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.0
-0.0
+0.2
-0.4
growth on oleic acid
YNB Glucose
+0.5
-0.1
-0.2
+0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
+0.0
+0.0
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.2
-0.0
+0.1
+0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.1
-0.1
+0.0
+0.3
growth on ricinoleic acid
YNB Glucose
+0.2
+0.7
-0.1
+0.2
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.2
+0.0
+0.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
-0.1
-0.3
+1.3
growth on oleic acid
YNB Oleic Acid
+0.5
+0.1
-0.1
+0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.8
-0.1
-0.1
+0.4
auxotrophy
Dropout Complete
+0.0
+0.2
-0.1
-0.2
+1.2
auxotrophy
YNB Glucose
+0.1
+0.2
+0.1
+0.1
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+1.0
-0.0
+0.2
+0.7
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