Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8866 and 8867 are separated by 2218 nucleotides8867 and 8868 are separated by 301 nucleotides8868 and 8869 are separated by 158 nucleotides8869 and 8870 are separated by 410 nucleotides mRNA_498: 8866 - K07179 RIOK2 RIO kinase 2, at 1,181,439 to 1,183,095 8866 mRNA_499: 8867 - K00850 pfkA, PFK 6-phosphofructokinase 1, at 1,185,314 to 1,188,631 8867 mRNA_500: 8868 - KOG2543 Origin recognition complex, subunit 5, at 1,188,933 to 1,191,266 8868 mRNA_501: 8869 - K11338 RUVBL2, RVB2, INO80J RuvB-like protein 2, at 1,191,425 to 1,193,408 8869 mRNA_502: 8870 - ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089, at 1,193,819 to 1,194,942 8870
Group Condition mRNA_498 mRNA_499 mRNA_500 mRNA_501 mRNA_502
8866 8867 8868 8869 8870
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. N.D. -0.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. N.D. -0.3
auxotrophy YNB Glucose N.D. N.D. N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. N.D. -0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. N.D. -0.1
auxotrophy Dropout Complete N.D. N.D. N.D. N.D. -0.0
growth on oleic acid YNB Glucose N.D. N.D. N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. N.D. +0.2
growth on ypd YPD N.D. N.D. N.D. N.D. +0.5
remove
mRNA_498
plot		 remove
mRNA_499
plot		 remove
mRNA_500		 remove
mRNA_501
plot		 remove
mRNA_502
plot