Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8870 and 8871 are separated by 264 nucleotides
8871 and 8872 are separated by 797 nucleotides
8872 and 8873 are separated by 349 nucleotides
8873 and 8874 are separated by 1427 nucleotides
mRNA_502: 8870 - ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089, at 1,193,819 to 1,194,942
8870
mRNA_503: 8871 - Hypothetical Protein, at 1,195,207 to 1,198,729
8871
mRNA_504: 8872 - Hypothetical Protein, at 1,199,527 to 1,200,402
8872
mRNA_505: 8873 - HMMPfam-ubiE/COQ5 methyltransferase family-PF01209,SUPERFAMILY--SSF53335, at 1,200,752 to 1,201,768
8873
mRNA_506: 8874 - K08793 STK32, YANK serine/threonine kinase 32, at 1,203,196 to 1,205,360
8874
Group
Condition
mRNA
_502
mRNA
_503
mRNA
_504
mRNA
_505
mRNA
_506
8870
8871
8872
8873
8874
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.1
-0.4
-0.6
-1.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
-0.4
-0.6
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.1
-0.2
-0.3
-1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.1
-0.8
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.1
-0.3
-0.2
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-1.0
-0.0
+0.3
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.0
-0.1
-0.3
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.6
-0.0
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-1.0
+0.0
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
-0.4
-0.1
-0.3
auxotrophy
Dropout Complete
-0.0
-0.6
+0.0
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.0
+0.3
-0.5
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.5
+0.0
-0.2
+0.1
auxotrophy
YNB Glucose
-0.2
-0.5
+0.1
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.8
-0.1
+0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
-0.3
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
-0.2
+0.0
+0.1
growth on ypd
YPD
+0.5
+0.1
-0.1
-0.0
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
+0.1
+0.7
-0.3
growth on oleic acid
YNB Glucose
+0.0
-0.4
+0.1
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.0
-0.1
-0.1
+0.7
remove
mRNA_502
plot
remove
mRNA_503
plot
remove
mRNA_504
remove
mRNA_505
plot
remove
mRNA_506
plot