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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8872 and 8873 are separated by 349 nucleotides
8873 and 8874 are separated by 1427 nucleotides
8874 and 8875 are separated by 794 nucleotides
8875 and 8876 are separated by 347 nucleotides
mRNA_504: 8872 - Hypothetical Protein, at 1,199,527 to 1,200,402
8872
mRNA_505: 8873 - HMMPfam-ubiE/COQ5 methyltransferase family-PF01209,SUPERFAMILY--SSF53335, at 1,200,752 to 1,201,768
8873
mRNA_506: 8874 - K08793 STK32, YANK serine/threonine kinase 32, at 1,203,196 to 1,205,360
8874
mRNA_507: 8875 - K19347 SUN1_2 SUN domain-containing protein 1/2, at 1,206,155 to 1,210,007
8875
mRNA_508: 8876 - K16466 CETN3, CDC31 centrin-3, at 1,210,355 to 1,211,163
8876
Group
Condition
mRNA
_504
mRNA
_505
mRNA
_506
mRNA
_507
mRNA
_508
8872
8873
8874
8875
8876
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.6
-1.7
-0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.3
-1.1
-1.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.6
-0.9
-1.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.1
-0.1
-0.5
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
-0.7
-0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.2
+0.0
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.2
-0.6
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.1
-0.3
+0.1
N.D.
growth on ypd
YPD
-0.1
-0.0
-0.3
-0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.5
-0.0
-0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
+0.2
-0.2
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.3
-0.0
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.2
+0.1
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.3
-0.5
+0.4
N.D.
auxotrophy
Dropout Complete
+0.0
-0.1
+0.1
+0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.0
+0.1
+0.3
N.D.
growth on ricinoleic acid
YNB Glucose
-0.1
+0.1
+0.2
-0.0
N.D.
growth on oleic acid
YNB Glucose
+0.1
+0.5
+0.2
-0.5
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
+0.7
-0.3
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
+0.7
-0.0
N.D.
auxotrophy
YNB Glucose
+0.1
+0.0
+0.1
+1.0
N.D.
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