Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8875 and 8876 are separated by 347 nucleotides8876 and 8877 are separated by 196 nucleotides8877 and 8878 are separated by 927 nucleotides8878 and 8879 are separated by 176 nucleotides mRNA_507: 8875 - K19347 SUN1_2 SUN domain-containing protein 1/2, at 1,206,155 to 1,210,007 8875 mRNA_508: 8876 - K16466 CETN3, CDC31 centrin-3, at 1,210,355 to 1,211,163 8876 mRNA_509: 8877 - K11566 ASK1 DASH complex subunit ASK1, at 1,211,360 to 1,213,561 8877 mRNA_510: 8878 - K01922 PPCS, coaB phosphopantothenate-cysteine ligase, at 1,214,489 to 1,216,016 8878 mRNA_511: 8879 - KOG1426 FOG RCC1 domain, at 1,216,193 to 1,218,102 8879
Group Condition mRNA_507 mRNA_508 mRNA_509 mRNA_510 mRNA_511
8875 8876 8877 8878 8879
facs on lipid accumulation Sorted High BODIPY Gate -1.4 N.D. +0.4 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. -0.5 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. -0.3 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.0 N.D. -0.3 N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -0.2 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. +0.2 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. +0.5 N.D. -0.5
growth on ypd YPD -0.2 N.D. -0.3 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.3 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 N.D. -0.3 N.D. -0.2
growth on oleic acid YNB Glucose -0.5 N.D. +0.0 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.0 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. +0.4 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.8 N.D. -0.4
auxotrophy Dropout Complete +0.2 N.D. +0.2 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. +0.0 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. +0.5 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.3 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.3 N.D. +0.3
growth on oleic acid YNB Oleic Acid -0.0 N.D. +0.8 N.D. +0.2
auxotrophy YNB Glucose +1.0 N.D. -0.1 N.D. +0.3
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