Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8889 and 8890 are separated by 136 nucleotides8890 and 8891 are separated by 197 nucleotides8891 and 8892 are separated by 283 nucleotides8892 and 8893 are separated by 411 nucleotides mRNA_521: 8889 - K15102 SLC25A3, PHC, PIC solute carrier family 25 (mitochondrial phosphate transporter), member 3, at 1,236,755 to 1,238,717 8889 mRNA_522: 8890 - K13026 DHX57 ATP-dependent RNA helicase DHX57, at 1,238,854 to 1,244,185 8890 mRNA_523: 8891 - K11644 SIN3A paired amphipathic helix protein Sin3a, at 1,244,383 to 1,249,643 8891 mRNA_524: 8892 - KOG0519 Sensory transduction histidine kinase, at 1,249,927 to 1,253,514 8892 mRNA_525: 8893 - K01265 map methionyl aminopeptidase, at 1,253,926 to 1,255,834 8893
Group Condition mRNA_521 mRNA_522 mRNA_523 mRNA_524 mRNA_525
8889 8890 8891 8892 8893
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -2.7 -0.0 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -0.8 +0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.1 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 +0.2 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 -0.2 +0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.1 -0.1 +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.0 +0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.7 -0.1 -0.7
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.5 +0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.2 +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 +0.5 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 +0.9 -0.6 -0.1
auxotrophy Dropout Complete N.D. +0.1 +0.2 -0.2 +0.1
growth on oleic acid YNB Glucose N.D. +0.0 +0.5 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.0 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 +0.8 +0.1 -0.6
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +1.0 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 +1.3 -0.0 +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.1 +1.5 +0.2 -0.3
auxotrophy YNB Glucose N.D. +0.4 +1.2 -0.2 +0.3
growth on ypd YPD N.D. +0.1 +1.6 +0.4 -0.3
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