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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8894 and 8895 are separated by 1044 nucleotides
8895 and 8896 are separated by 510 nucleotides
8896 and 8897 are separated by 1576 nucleotides
8897 and 8898 are separated by 606 nucleotides
mRNA_526: 8894 - K02915 RP-L34e, RPL34 large subunit ribosomal protein L34e, at 1,256,147 to 1,256,994
8894
mRNA_527: 8895 - Hypothetical Protein, at 1,258,039 to 1,258,831
8895
mRNA_528: 8896 - BLAST hydroxymethylglutaryl-mitochondrial isoform 1 [Lichth..., at 1,259,342 to 1,261,066
8896
mRNA_529: 8897 - Hypothetical Protein, at 1,262,643 to 1,263,431
8897
mRNA_530: 8898 - Hypothetical Protein, at 1,264,038 to 1,264,727
8898
Group
Condition
mRNA
_526
mRNA
_527
mRNA
_528
mRNA
_529
mRNA
_530
8894
8895
8896
8897
8898
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
-1.8
-0.5
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
-0.4
-1.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
-0.9
-0.1
N.D.
auxotrophy
YNB Glucose
N.D.
-0.6
-0.4
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.3
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
-0.8
-0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
+0.0
-0.8
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.4
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
-0.0
-0.3
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.4
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
-0.4
+0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+0.4
-0.8
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.0
-0.2
+0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.0
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
-0.3
+0.3
N.D.
auxotrophy
Dropout Complete
N.D.
-0.4
-0.0
+0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
-0.0
+0.0
N.D.
growth on oleic acid
YNB Glucose
N.D.
+0.3
-0.2
-0.2
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.4
+0.0
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.4
+0.2
-0.2
N.D.
growth on ypd
YPD
N.D.
+0.3
+1.3
+0.9
N.D.
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