Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8902 and 8903 are separated by 230 nucleotides8903 and 8904 are separated by 205 nucleotides8904 and 8905 are separated by 401 nucleotides8905 and 8906 are separated by 816 nucleotides mRNA_534: 8902 - K08054 CANX calnexin, at 1,270,222 to 1,272,470 8902 mRNA_535: 8903 - HMMPfam-Ribosomal protein S21-PF01165,TIGRFAM-S21p ribosomal protein S21-TIGR00030, at 1,272,701 to 1,273,396 8903 mRNA_536: 8904 - K09548 PFDN1 prefoldin subunit 1, at 1,273,602 to 1,274,230 8904 mRNA_537: 8905 - KOG0725 Reductases with broad range of substrate specificities, at 1,274,632 to 1,275,903 8905 mRNA_538: 8906 - Hypothetical Protein, at 1,276,720 to 1,277,120 8906
Group Condition mRNA_534 mRNA_535 mRNA_536 mRNA_537 mRNA_538
8902 8903 8904 8905 8906
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -1.8 -0.6 +0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. -1.1 -0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -1.1 -0.1 +0.2
auxotrophy Dropout Complete -0.1 N.D. -1.0 -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -1.1 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. -0.8 +0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.2 +0.0 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. +0.3 +0.1 -0.5
growth on oleic acid YNB Glucose -0.0 N.D. -0.2 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.5 +0.3 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.1 +0.2 +0.2
growth on ricinoleic acid YNB Glucose -0.0 N.D. +0.1 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. -0.4 +0.0 +0.6
auxotrophy YNB Glucose +0.2 N.D. -0.6 +0.1 +0.4
growth on ypd YPD +0.1 N.D. -0.5 +0.4 +0.1
growth on oleic acid YNB Oleic Acid +0.4 N.D. -0.3 +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. -0.1 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.4 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. -0.1 +0.1 +1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.3 +0.7 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 N.D. +0.7 +0.2 -0.1
remove
mRNA_534
plot
remove
mRNA_535
plot
remove
mRNA_536
remove
mRNA_537
plot
remove
mRNA_538
plot