Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8905 and 8906 are separated by 816 nucleotides8906 and 8907 are separated by 508 nucleotides8907 and 8908 are separated by 513 nucleotides8908 and 8909 are separated by 429 nucleotides mRNA_537: 8905 - KOG0725 Reductases with broad range of substrate specificities, at 1,274,632 to 1,275,903 8905 mRNA_538: 8906 - Hypothetical Protein, at 1,276,720 to 1,277,120 8906 mRNA_539: 8907 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 1,277,629 to 1,279,340 8907 mRNA_540: 8908 - KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases), at 1,279,854 to 1,286,363 8908 mRNA_541: 8909 - HMMPfam-NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8)-PF05821, at 1,286,793 to 1,287,579 8909
Group Condition mRNA_537 mRNA_538 mRNA_539 mRNA_540 mRNA_541
8905 8906 8907 8908 8909
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.5 -2.3 -1.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 -1.6 -1.8 N.D.
growth on ricinoleic acid YNB Glucose +0.0 -0.1 -2.1 -0.6 N.D.
auxotrophy Dropout Complete -0.1 +0.0 -1.9 -0.3 N.D.
growth on oleic acid YNB Glucose -0.2 +0.4 -2.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.0 -1.6 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.6 -1.9 -0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.1 -1.5 -0.3 N.D.
auxotrophy YNB Glucose +0.1 +0.4 -1.5 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.3 -1.0 -0.3 N.D.
growth on ypd YPD +0.4 +0.1 -0.8 -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.7 -0.8 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.5 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 -0.4 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.4 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.4 -0.4 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.4 -0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 +0.1 +0.0 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.3 +0.9 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +1.0 -0.2 +0.2 N.D.
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