Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8907 and 8908 are separated by 513 nucleotides8908 and 8909 are separated by 429 nucleotides8909 and 8910 are separated by 223 nucleotides8910 and 8911 are separated by 275 nucleotides mRNA_539: 8907 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 1,277,629 to 1,279,340 8907 mRNA_540: 8908 - KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases), at 1,279,854 to 1,286,363 8908 mRNA_541: 8909 - HMMPfam-NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8)-PF05821, at 1,286,793 to 1,287,579 8909 mRNA_542: 8910 - KOG0118 FOG RRM domain, at 1,287,803 to 1,289,304 8910 mRNA_543: 8911 - K14838 NOP15 nucleolar protein 15, at 1,289,580 to 1,290,883 8911
Group Condition mRNA_539 mRNA_540 mRNA_541 mRNA_542 mRNA_543
8907 8908 8909 8910 8911
growth on ricinoleic acid YNB Methylricinoleic Acid -2.3 -1.4 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.6 -1.8 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -2.1 -0.6 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -1.9 -0.3 N.D. N.D. N.D.
auxotrophy Dropout Complete -1.9 -0.3 N.D. N.D. N.D.
growth on oleic acid YNB Glucose -2.0 -0.1 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid -1.5 -0.3 N.D. N.D. N.D.
auxotrophy YNB Glucose -1.5 -0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -1.6 -0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.0 -0.3 N.D. N.D. N.D.
growth on ypd YPD -0.8 -0.4 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 -0.5 N.D. N.D. N.D.
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