Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8910 and 8911 are separated by 275 nucleotides8911 and 8912 are separated by 362 nucleotides8912 and 8913 are separated by 574 nucleotides8913 and 8914 are separated by 229 nucleotides mRNA_542: 8910 - KOG0118 FOG RRM domain, at 1,287,803 to 1,289,304 8910 mRNA_543: 8911 - K14838 NOP15 nucleolar protein 15, at 1,289,580 to 1,290,883 8911 mRNA_544: 8912 - K00902 E2.7.1.108 dolichol kinase, at 1,291,246 to 1,294,493 8912 mRNA_545: 8913 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,295,068 to 1,298,428 8913 mRNA_546: 8914 - K00799 GST, gst glutathione S-transferase, at 1,298,658 to 1,299,726 8914
Group Condition mRNA_542 mRNA_543 mRNA_544 mRNA_545 mRNA_546
8910 8911 8912 8913 8914
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. -0.6 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. -0.0 -0.6
auxotrophy Dropout Complete N.D. N.D. N.D. -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. -0.1 -0.5
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. +0.0 -0.5
auxotrophy YNB Glucose N.D. N.D. N.D. +0.1 -0.6
growth on oleic acid YNB Glucose N.D. N.D. N.D. -0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. +0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. -0.2 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.1 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. +0.3 +0.3
growth on ypd YPD N.D. N.D. N.D. -0.2 +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. +0.2 +0.6
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