Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8915 and 8916 are separated by 575 nucleotides
8916 and 8917 are separated by 732 nucleotides
8917 and 8918 are separated by 189 nucleotides
8918 and 8919 are separated by 811 nucleotides
mRNA_547: 8915 - KOG2385 Uncharacterized conserved protein, at 1,299,978 to 1,303,835
8915
mRNA_548: 8916 - K15084 SLC25A16, GDA, LEU5 solute carrier family 25 (mitochondrial carrier protein), member 16, at 1,304,411 to 1,305,873
8916
mRNA_549: 8917 - K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1, at 1,306,606 to 1,311,810
8917
mRNA_550: 8918 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 1,312,000 to 1,313,154
8918
mRNA_551: 8919 - KOG1515 Arylacetamide deacetylase, at 1,313,966 to 1,316,695
8919
Group
Condition
mRNA
_547
mRNA
_548
mRNA
_549
mRNA
_550
mRNA
_551
8915
8916
8917
8918
8919
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.9
N.D.
-0.6
-0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
-1.8
N.D.
+0.0
+0.2
-0.0
growth on oleic acid
YNB Oleic Acid
-0.2
N.D.
-0.0
-0.6
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
-1.0
-0.2
-0.2
auxotrophy
Dropout Complete
-0.4
N.D.
+0.1
-0.3
-0.5
auxotrophy
YNB Glucose
-0.2
N.D.
-0.7
-0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-1.1
N.D.
+0.3
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
N.D.
-0.1
-0.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
N.D.
-1.1
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+1.2
N.D.
-1.1
-0.5
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.3
-0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
N.D.
+0.3
-0.2
+0.5
growth on oleic acid
YNB Glucose
+0.7
N.D.
-0.5
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
N.D.
+0.7
-0.0
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
N.D.
+1.1
+0.5
-0.6
growth on ypd
YPD
+0.3
N.D.
+0.3
+0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
N.D.
-0.4
+0.2
+0.5
growth on ricinoleic acid
YNB Glucose
+0.7
N.D.
-0.2
+0.2
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
N.D.
+0.8
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
N.D.
+1.0
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
+1.4
+0.2
+0.0
remove
mRNA_547
plot
remove
mRNA_548
plot
remove
mRNA_549
remove
mRNA_550
plot
remove
mRNA_551
plot