Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8917 and 8918 are separated by 189 nucleotides8918 and 8919 are separated by 811 nucleotides8919 and 8920 are separated by 237 nucleotides8920 and 8921 are separated by 200 nucleotides mRNA_549: 8917 - K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1, at 1,306,606 to 1,311,810 8917 mRNA_550: 8918 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 1,312,000 to 1,313,154 8918 mRNA_551: 8919 - KOG1515 Arylacetamide deacetylase, at 1,313,966 to 1,316,695 8919 mRNA_552: 8920 - KOG1761 Signal recognition particle, subunit Srp14, at 1,316,933 to 1,317,920 8920 mRNA_553: 8921 - KOG0907 Thioredoxin, at 1,318,121 to 1,318,450 8921
Group Condition mRNA_549 mRNA_550 mRNA_551 mRNA_552 mRNA_553
8917 8918 8919 8920 8921
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.4 +0.2 -0.9 N.D.
growth on oleic acid YNB Oleic Acid -0.0 -0.6 -0.3 -0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -1.0 -0.2 -0.2 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -1.1 -0.5 +0.1 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.4 +0.3 -1.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 +0.5 -1.8 N.D.
growth on oleic acid YNB Glucose -0.5 -0.4 +0.2 -0.3 N.D.
auxotrophy Dropout Complete +0.1 -0.3 -0.5 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 +0.1 +0.1 -0.0 N.D.
auxotrophy YNB Glucose -0.7 -0.1 +0.2 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 -0.2 -0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 -0.0 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.0 -0.3 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 +0.5 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.2 +0.6 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 +0.1 +0.0 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.0 +0.2 -0.3 N.D.
growth on ypd YPD +0.3 +0.2 -0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.4 +0.2 +0.0 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 +0.2 -0.3 +0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +1.1 +0.5 -0.6 +0.5 N.D.
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