Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8918 and 8919 are separated by 811 nucleotides8919 and 8920 are separated by 237 nucleotides8920 and 8921 are separated by 200 nucleotides8921 and 8922 are separated by 1009 nucleotides mRNA_550: 8918 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 1,312,000 to 1,313,154 8918 mRNA_551: 8919 - KOG1515 Arylacetamide deacetylase, at 1,313,966 to 1,316,695 8919 mRNA_552: 8920 - KOG1761 Signal recognition particle, subunit Srp14, at 1,316,933 to 1,317,920 8920 mRNA_553: 8921 - KOG0907 Thioredoxin, at 1,318,121 to 1,318,450 8921 mRNA_554: 8922 - K13337 PEX19 peroxin-19, at 1,319,460 to 1,321,018 8922
Group Condition mRNA_550 mRNA_551 mRNA_552 mRNA_553 mRNA_554
8918 8919 8920 8921 8922
growth on oleic acid YNB Oleic Acid -0.6 -0.3 -0.5 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.5 -1.8 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.3 -1.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.2 -0.9 N.D. N.D.
auxotrophy Dropout Complete -0.3 -0.5 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 -0.5 N.D. N.D.
growth on oleic acid YNB Glucose -0.4 +0.2 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 -0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.0 -0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.1 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.3 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.2 -0.3 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 -0.1 N.D. N.D.
auxotrophy YNB Glucose -0.1 +0.2 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 +0.3 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 -0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.6 +0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.6 -0.3 N.D. N.D.
growth on ypd YPD +0.2 -0.1 +0.5 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.5 -0.1 N.D. N.D.
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