Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8920 and 8921 are separated by 200 nucleotides8921 and 8922 are separated by 1009 nucleotides8922 and 8923 are separated by 445 nucleotides8923 and 8924 are separated by 288 nucleotides mRNA_552: 8920 - KOG1761 Signal recognition particle, subunit Srp14, at 1,316,933 to 1,317,920 8920 mRNA_553: 8921 - KOG0907 Thioredoxin, at 1,318,121 to 1,318,450 8921 mRNA_554: 8922 - K13337 PEX19 peroxin-19, at 1,319,460 to 1,321,018 8922 mRNA_555: 8923 - K03115 CSNK2B casein kinase II subunit beta, at 1,321,464 to 1,322,533 8923 mRNA_556: 8924 - HMMPfam-Acetyltransferase (GNAT) domain-PF13302,SUPERFAMILY--SSF55729, at 1,322,822 to 1,323,921 8924
Group Condition mRNA_552 mRNA_553 mRNA_554 mRNA_555 mRNA_556
8920 8921 8922 8923 8924
facs on lipid accumulation Sorted High BODIPY Gate -1.8 N.D. N.D. N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 N.D. N.D. N.D. -0.6
facs on lipid accumulation Sorted No BODIPY Gate -1.1 N.D. N.D. N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.5 N.D. N.D. N.D. -0.4
growth on oleic acid YNB Glucose -0.3 N.D. N.D. N.D. -0.4
growth on oleic acid YNB Oleic Acid -0.5 N.D. N.D. N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 N.D. N.D. N.D. -0.8
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. N.D. N.D. -0.2
auxotrophy Dropout Complete -0.2 N.D. N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. N.D. -0.0
auxotrophy YNB Glucose +0.1 N.D. N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. N.D. N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.3 N.D. N.D. N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. N.D. N.D. +0.6
growth on ypd YPD +0.5 N.D. N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. N.D. N.D. +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 N.D. N.D. N.D. +1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. N.D. N.D. +0.9
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