Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8922 and 8923 are separated by 445 nucleotides8923 and 8924 are separated by 288 nucleotides8924 and 8925 are separated by 728 nucleotides8925 and 8926 are separated by 834 nucleotides mRNA_554: 8922 - K13337 PEX19 peroxin-19, at 1,319,460 to 1,321,018 8922 mRNA_555: 8923 - K03115 CSNK2B casein kinase II subunit beta, at 1,321,464 to 1,322,533 8923 mRNA_556: 8924 - HMMPfam-Acetyltransferase (GNAT) domain-PF13302,SUPERFAMILY--SSF55729, at 1,322,822 to 1,323,921 8924 mRNA_557: 8925 - HMMPfam-Ras association (RalGDS/AF-6) domain-PF00788,ProSiteProfiles-Ras-associating (RA) domain profile.-PS50200,SMART-Ras association (RalGDS/AF-6) domain-SM00314,SUPERFAMILY--SSF54236, at 1,324,650 to 1,329,010 8925 mRNA_558: 8926 - HMMPfam-SH3 domain-PF00018,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 1,329,845 to 1,332,752 8926
Group Condition mRNA_554 mRNA_555 mRNA_556 mRNA_557 mRNA_558
8922 8923 8924 8925 8926
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.4 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.6 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.8 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.4 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.4 +0.2 N.D.
growth on oleic acid YNB Glucose N.D. N.D. -0.4 +0.2 N.D.
growth on ypd YPD N.D. N.D. -0.3 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.0 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.3 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.2 +0.3 N.D.
auxotrophy Dropout Complete N.D. N.D. -0.1 +0.2 N.D.
auxotrophy YNB Glucose N.D. N.D. -0.2 +0.5 N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.1 +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.0 +0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.0 +0.6 N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.2 +0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.0 +1.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.9 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.7 +0.8 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.6 +1.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +1.2 +1.0 N.D.
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