Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8926 and 8927 are separated by 645 nucleotides8927 and 8928 are separated by 1430 nucleotides8928 and 8929 are separated by 355 nucleotides8929 and 8930 are separated by 539 nucleotides mRNA_558: 8926 - HMMPfam-SH3 domain-PF00018,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 1,329,845 to 1,332,752 8926 mRNA_559: 8927 - KOG4672 Uncharacterized conserved low complexity protein, at 1,333,398 to 1,335,053 8927 mRNA_560: 8928 - Hypothetical Protein, at 1,336,484 to 1,340,949 8928 mRNA_561: 8929 - Hypothetical Protein, at 1,341,305 to 1,346,099 8929 mRNA_562: 8930 - HMMPfam-HPC2 and ubinuclein domain-PF08729, at 1,346,639 to 1,349,486 8930
Group Condition mRNA_558 mRNA_559 mRNA_560 mRNA_561 mRNA_562
8926 8927 8928 8929 8930
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -2.8 +0.1 +0.1 -1.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.7 -0.1 +0.0 -1.2
growth on oleic acid YNB Glucose N.D. +0.4 -0.2 -0.0 -2.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.4 -0.0 -0.4 +0.4
auxotrophy Dropout Complete N.D. +0.0 -0.2 -0.1 -1.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 +0.0 -0.3 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 -0.0 +0.2 -0.7
growth on ypd YPD N.D. +0.1 +0.2 +0.1 -1.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 +0.3 -0.1 -0.9
growth on ricinoleic acid YNB Glucose N.D. +0.2 -0.1 -0.0 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 +0.0 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.7 +0.3 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.5 +0.0 +0.1 -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.1 -0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 -0.1 -0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.2 -0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 -0.1 +0.0 +0.1
auxotrophy YNB Glucose N.D. -1.2 -0.1 -0.1 +1.3
growth on oleic acid YNB Oleic Acid N.D. +0.9 +0.1 +0.0 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +1.0 -0.1 -0.3 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.0 +0.2 +1.9
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