Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8928 and 8929 are separated by 355 nucleotides8929 and 8930 are separated by 539 nucleotides8930 and 8931 are separated by 198 nucleotides8931 and 8932 are separated by 88 nucleotides mRNA_560: 8928 - Hypothetical Protein, at 1,336,484 to 1,340,949 8928 mRNA_561: 8929 - Hypothetical Protein, at 1,341,305 to 1,346,099 8929 mRNA_562: 8930 - HMMPfam-HPC2 and ubinuclein domain-PF08729, at 1,346,639 to 1,349,486 8930 mRNA_563: 8931 - K05287 PIGF phosphatidylinositol glycan, class F, at 1,349,685 to 1,350,957 8931 mRNA_564: 8932 - K01230 MAN1 mannosyl-oligosaccharide alpha-1,2-mannosidase, at 1,351,046 to 1,353,534 8932
Group Condition mRNA_560 mRNA_561 mRNA_562 mRNA_563 mRNA_564
8928 8929 8930 8931 8932
growth on oleic acid YNB Glucose -0.2 -0.0 -2.0 -0.4 -0.2
auxotrophy Dropout Complete -0.2 -0.1 -1.0 -1.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.1 -0.9 -1.6 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.2 -0.7 -1.4 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 -0.6 -0.1 -0.8
growth on ricinoleic acid YNB Glucose -0.1 -0.0 -0.7 -0.5 -0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.0 -1.1 -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.3 -0.5 -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.0 +0.1 -1.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 +0.0 -0.7 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.1 -1.0 -0.4 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 -0.3 +0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.0 -1.2 +0.1 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 -1.1 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 -0.2 +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.3 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 -0.2 -0.2 -0.1
growth on ypd YPD +0.2 +0.1 -1.1 +0.8 -0.1
auxotrophy YNB Glucose -0.1 -0.1 +1.3 -1.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.4 +0.4 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.2 +1.9 -0.2 -0.6
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