Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8929 and 8930 are separated by 539 nucleotides8930 and 8931 are separated by 198 nucleotides8931 and 8932 are separated by 88 nucleotides8932 and 8933 are separated by 110 nucleotides mRNA_561: 8929 - Hypothetical Protein, at 1,341,305 to 1,346,099 8929 mRNA_562: 8930 - HMMPfam-HPC2 and ubinuclein domain-PF08729, at 1,346,639 to 1,349,486 8930 mRNA_563: 8931 - K05287 PIGF phosphatidylinositol glycan, class F, at 1,349,685 to 1,350,957 8931 mRNA_564: 8932 - K01230 MAN1 mannosyl-oligosaccharide alpha-1,2-mannosidase, at 1,351,046 to 1,353,534 8932 mRNA_565: 8933 - K03256 TRM6, GCD10 tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit, at 1,353,645 to 1,355,726 8933
Group Condition mRNA_561 mRNA_562 mRNA_563 mRNA_564 mRNA_565
8929 8930 8931 8932 8933
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.9 -1.6 -0.4 N.D.
growth on oleic acid YNB Glucose -0.0 -2.0 -0.4 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.7 -1.4 -0.6 N.D.
auxotrophy Dropout Complete -0.1 -1.0 -1.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.6 -0.1 -0.8 N.D.
growth on oleic acid YNB Oleic Acid +0.0 -1.1 -0.3 -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.0 -0.7 -0.5 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.5 -0.2 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 -1.0 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -1.0 -0.4 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.3 +0.1 -0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 -0.7 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -1.1 +0.0 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -1.2 +0.1 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 +0.0 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.2 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3 -0.1 -0.1 N.D.
growth on ypd YPD +0.1 -1.1 +0.8 -0.1 N.D.
auxotrophy YNB Glucose -0.1 +1.3 -1.1 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.4 +0.3 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +1.9 -0.2 -0.6 N.D.
remove
mRNA_561
plot
remove
mRNA_562
plot
remove
mRNA_563
remove
mRNA_564
plot
remove
mRNA_565
plot