Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8930 and 8931 are separated by 198 nucleotides8931 and 8932 are separated by 88 nucleotides8932 and 8933 are separated by 110 nucleotides8933 and 8934 are separated by 117 nucleotides mRNA_562: 8930 - HMMPfam-HPC2 and ubinuclein domain-PF08729, at 1,346,639 to 1,349,486 8930 mRNA_563: 8931 - K05287 PIGF phosphatidylinositol glycan, class F, at 1,349,685 to 1,350,957 8931 mRNA_564: 8932 - K01230 MAN1 mannosyl-oligosaccharide alpha-1,2-mannosidase, at 1,351,046 to 1,353,534 8932 mRNA_565: 8933 - K03256 TRM6, GCD10 tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit, at 1,353,645 to 1,355,726 8933 mRNA_566: 8934 - HMMPfam-Oligosaccaryltransferase-PF10215,SUPERFAMILY--SSF103464, at 1,355,844 to 1,356,185 8934
Group Condition mRNA_562 mRNA_563 mRNA_564 mRNA_565 mRNA_566
8930 8931 8932 8933 8934
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -1.6 -0.4 N.D. +0.1
growth on oleic acid YNB Glucose -2.0 -0.4 -0.2 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -1.4 -0.6 N.D. +0.4
auxotrophy Dropout Complete -1.0 -1.2 -0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.1 -0.8 N.D. -0.7
growth on oleic acid YNB Oleic Acid -1.1 -0.3 -0.4 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.7 -0.5 -0.4 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 -1.0 -0.2 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.2 -0.3 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.7 -0.2 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 -0.1 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.2 +0.1 +0.4 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 -0.6 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.0 -0.4 +0.4 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 +0.0 +0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.0 -0.2 N.D. -0.2
growth on ypd YPD -1.1 +0.8 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.1 N.D. +0.1
auxotrophy YNB Glucose +1.3 -1.1 -0.3 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.3 +0.3 N.D. -1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.9 -0.2 -0.6 N.D. -0.2
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