Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8931 and 8932 are separated by 88 nucleotides8932 and 8933 are separated by 110 nucleotides8933 and 8934 are separated by 117 nucleotides8934 and 8935 are separated by 270 nucleotides mRNA_563: 8931 - K05287 PIGF phosphatidylinositol glycan, class F, at 1,349,685 to 1,350,957 8931 mRNA_564: 8932 - K01230 MAN1 mannosyl-oligosaccharide alpha-1,2-mannosidase, at 1,351,046 to 1,353,534 8932 mRNA_565: 8933 - K03256 TRM6, GCD10 tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit, at 1,353,645 to 1,355,726 8933 mRNA_566: 8934 - HMMPfam-Oligosaccaryltransferase-PF10215,SUPERFAMILY--SSF103464, at 1,355,844 to 1,356,185 8934 mRNA_567: 8935 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 1,356,456 to 1,359,397 8935
Group Condition mRNA_563 mRNA_564 mRNA_565 mRNA_566 mRNA_567
8931 8932 8933 8934 8935
growth on ricinoleic acid YNB Methylricinoleic Acid -1.6 -0.4 N.D. +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.6 N.D. +0.4 -0.2
auxotrophy Dropout Complete -1.2 -0.3 N.D. +0.1 -0.3
auxotrophy YNB Glucose -1.1 -0.3 N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.8 N.D. -0.7 -0.0
auxotrophy YNB Glucose 75mM Methionine -1.0 -0.2 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.5 -0.4 N.D. +0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.2 N.D. -0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.4 N.D. -0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.6 N.D. -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 N.D. -0.5 +0.2
growth on oleic acid YNB Glucose -0.4 -0.2 N.D. +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.6 N.D. -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 N.D. -0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.3 N.D. -1.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 N.D. +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.4 N.D. -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.2 N.D. +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.4 N.D. +0.3 +0.0
growth on ypd YPD +0.8 -0.1 N.D. -0.1 +0.4
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