Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8932 and 8933 are separated by 110 nucleotides8933 and 8934 are separated by 117 nucleotides8934 and 8935 are separated by 270 nucleotides8935 and 8936 are separated by 229 nucleotides mRNA_564: 8932 - K01230 MAN1 mannosyl-oligosaccharide alpha-1,2-mannosidase, at 1,351,046 to 1,353,534 8932 mRNA_565: 8933 - K03256 TRM6, GCD10 tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit, at 1,353,645 to 1,355,726 8933 mRNA_566: 8934 - HMMPfam-Oligosaccaryltransferase-PF10215,SUPERFAMILY--SSF103464, at 1,355,844 to 1,356,185 8934 mRNA_567: 8935 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 1,356,456 to 1,359,397 8935 mRNA_568: 8936 - K14454 GOT1 aspartate aminotransferase, cytoplasmic, at 1,359,627 to 1,361,515 8936
Group Condition mRNA_564 mRNA_565 mRNA_566 mRNA_567 mRNA_568
8932 8933 8934 8935 8936
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. +0.1 -0.3 -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 N.D. -0.7 -0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. +0.4 -0.2 -0.9
growth on oleic acid YNB Oleic Acid -0.4 N.D. -0.3 -0.0 -0.4
auxotrophy YNB Glucose -0.3 N.D. -0.3 -0.1 -0.4
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.0 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 N.D. -0.2 +0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -0.2 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.5 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 N.D. -0.2 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.2 +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. -0.2 -0.1 -0.1
growth on oleic acid YNB Glucose -0.2 N.D. +0.0 +0.0 -0.3
auxotrophy Dropout Complete -0.3 N.D. +0.1 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. -0.1 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. -0.2 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. -1.1 +0.3 +0.2
growth on ypd YPD -0.1 N.D. -0.1 +0.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.1 +0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. +0.2 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. +0.3 +0.0 -0.1
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