Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8933 and 8934 are separated by 117 nucleotides8934 and 8935 are separated by 270 nucleotides8935 and 8936 are separated by 229 nucleotides8936 and 8937 are separated by 707 nucleotides mRNA_565: 8933 - K03256 TRM6, GCD10 tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit, at 1,353,645 to 1,355,726 8933 mRNA_566: 8934 - HMMPfam-Oligosaccaryltransferase-PF10215,SUPERFAMILY--SSF103464, at 1,355,844 to 1,356,185 8934 mRNA_567: 8935 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 1,356,456 to 1,359,397 8935 mRNA_568: 8936 - K14454 GOT1 aspartate aminotransferase, cytoplasmic, at 1,359,627 to 1,361,515 8936 mRNA_569: 8937 - K07059 K07059 uncharacterized protein, at 1,362,223 to 1,362,868 8937
Group Condition mRNA_565 mRNA_566 mRNA_567 mRNA_568 mRNA_569
8933 8934 8935 8936 8937
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.3 -1.3 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.1 +0.3 +0.2 -0.5
growth on ypd YPD N.D. -0.1 +0.4 -0.3 -0.9
auxotrophy YNB Glucose N.D. -0.3 -0.1 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.7 -0.0 +0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.5 +0.2 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -0.1 -0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.1 -0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 -0.2 -0.9 +0.3
growth on ricinoleic acid YNB Glucose N.D. +0.0 -0.3 -0.3 +0.1
auxotrophy Dropout Complete N.D. +0.1 -0.3 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +0.0 -0.2 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.3 -0.0 -0.4 +0.5
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.1 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 +0.0 -0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.1 -0.3 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +0.1 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.0 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.1 -0.3 +0.5
growth on oleic acid YNB Glucose N.D. +0.0 +0.0 -0.3 +0.8
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