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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8938 and 8939 are separated by 582 nucleotides
8939 and 8940 are separated by 312 nucleotides
8940 and 8941 are separated by 197 nucleotides
8941 and 8942 are separated by 462 nucleotides
mRNA_570: 8938 - Hypothetical Protein, at 1,363,774 to 1,366,185
8938
mRNA_571: 8939 - Hypothetical Protein, at 1,366,768 to 1,367,604
8939
mRNA_572: 8940 - Hypothetical Protein, at 1,367,917 to 1,369,757
8940
mRNA_573: 8941 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 1,369,955 to 1,372,100
8941
mRNA_574: 8942 - K02999 RPA1, POLR1A DNA-directed RNA polymerase I subunit RPA1, at 1,372,563 to 1,378,346
8942
Group
Condition
mRNA
_570
mRNA
_571
mRNA
_572
mRNA
_573
mRNA
_574
8938
8939
8940
8941
8942
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
-0.0
-0.8
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
-0.1
-0.0
N.D.
growth on ypd
YPD
-0.0
N.D.
+0.0
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
+0.2
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.3
N.D.
-0.0
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
N.D.
-0.2
+0.5
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
N.D.
-0.0
-0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
-0.2
+0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
N.D.
-0.1
+0.4
N.D.
growth on oleic acid
YNB Glucose
-0.0
N.D.
+0.2
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
N.D.
-0.0
+0.6
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.1
+0.7
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
N.D.
-0.4
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
-0.3
+0.9
N.D.
auxotrophy
Dropout Complete
+0.1
N.D.
+0.2
+0.5
N.D.
auxotrophy
YNB Glucose
+0.3
N.D.
+0.1
+0.4
N.D.
growth on ricinoleic acid
YNB Glucose
+0.4
N.D.
+0.1
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
-0.2
+1.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
N.D.
-0.1
+1.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
+0.5
+0.6
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
+0.3
+1.0
N.D.
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