Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8939 and 8940 are separated by 312 nucleotides8940 and 8941 are separated by 197 nucleotides8941 and 8942 are separated by 462 nucleotides8942 and 8943 are separated by 337 nucleotides mRNA_571: 8939 - Hypothetical Protein, at 1,366,768 to 1,367,604 8939 mRNA_572: 8940 - Hypothetical Protein, at 1,367,917 to 1,369,757 8940 mRNA_573: 8941 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 1,369,955 to 1,372,100 8941 mRNA_574: 8942 - K02999 RPA1, POLR1A DNA-directed RNA polymerase I subunit RPA1, at 1,372,563 to 1,378,346 8942 mRNA_575: 8943 - K00940 ndk, NME nucleoside-diphosphate kinase, at 1,378,684 to 1,379,466 8943
Group Condition mRNA_571 mRNA_572 mRNA_573 mRNA_574 mRNA_575
8939 8940 8941 8942 8943
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 -0.8 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 +0.0 N.D. N.D.
growth on ypd YPD N.D. +0.0 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 +0.5 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 +0.4 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +0.5 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.4 N.D. N.D.
growth on oleic acid YNB Glucose N.D. +0.2 +0.3 N.D. N.D.
auxotrophy YNB Glucose N.D. +0.1 +0.4 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 +0.9 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 +0.7 N.D. N.D.
auxotrophy Dropout Complete N.D. +0.2 +0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +1.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +1.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 +0.6 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 +1.0 N.D. N.D.
remove
mRNA_571
plot
remove
mRNA_572
plot
remove
mRNA_573
remove
mRNA_574
plot
remove
mRNA_575
plot