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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8939 and 8940 are separated by 312 nucleotides
8940 and 8941 are separated by 197 nucleotides
8941 and 8942 are separated by 462 nucleotides
8942 and 8943 are separated by 337 nucleotides
mRNA_571: 8939 - Hypothetical Protein, at 1,366,768 to 1,367,604
8939
mRNA_572: 8940 - Hypothetical Protein, at 1,367,917 to 1,369,757
8940
mRNA_573: 8941 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 1,369,955 to 1,372,100
8941
mRNA_574: 8942 - K02999 RPA1, POLR1A DNA-directed RNA polymerase I subunit RPA1, at 1,372,563 to 1,378,346
8942
mRNA_575: 8943 - K00940 ndk, NME nucleoside-diphosphate kinase, at 1,378,684 to 1,379,466
8943
Group
Condition
mRNA
_571
mRNA
_572
mRNA
_573
mRNA
_574
mRNA
_575
8939
8940
8941
8942
8943
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.0
-0.8
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
-0.0
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.0
-0.0
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
+0.0
N.D.
N.D.
growth on ypd
YPD
N.D.
+0.0
+0.1
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.4
+0.5
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.2
+0.4
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
+0.0
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
+0.5
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
+0.4
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.4
N.D.
N.D.
growth on oleic acid
YNB Glucose
N.D.
+0.2
+0.3
N.D.
N.D.
auxotrophy
YNB Glucose
N.D.
+0.1
+0.4
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
+0.6
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.9
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.7
N.D.
N.D.
auxotrophy
Dropout Complete
N.D.
+0.2
+0.5
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+1.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
+1.1
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.5
+0.6
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.3
+1.0
N.D.
N.D.
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