Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8943 and 8944 are separated by 286 nucleotides8944 and 8945 are separated by 176 nucleotides8945 and 8946 are separated by 328 nucleotides8946 and 8947 are separated by 238 nucleotides mRNA_575: 8943 - K00940 ndk, NME nucleoside-diphosphate kinase, at 1,378,684 to 1,379,466 8943 mRNA_576: 8944 - K20182 VPS33 vacuolar protein sorting-associated protein 33, at 1,379,753 to 1,382,507 8944 mRNA_577: 8945 - Hypothetical Protein, at 1,382,684 to 1,384,433 8945 mRNA_578: 8946 - K05687 PARK7 protein DJ-1, at 1,384,762 to 1,386,533 8946 mRNA_579: 8947 - K10686 UBE1C, UBA3 ubiquitin-activating enzyme E1 C, at 1,386,772 to 1,388,532 8947
Group Condition mRNA_575 mRNA_576 mRNA_577 mRNA_578 mRNA_579
8943 8944 8945 8946 8947
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -2.9 +0.2 -2.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -2.2 -0.5 +0.3 N.D.
growth on ypd YPD N.D. -1.0 -0.1 -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.6 +0.3 -0.4 N.D.
growth on ricinoleic acid YNB Glucose N.D. -1.0 +0.4 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.5 +0.4 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.1 +0.5 +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 +0.2 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.7 +0.2 +0.2 N.D.
auxotrophy Dropout Complete N.D. -0.4 +0.6 -0.2 N.D.
growth on oleic acid YNB Glucose N.D. +0.1 +0.1 -0.2 N.D.
auxotrophy YNB Glucose N.D. -0.2 +0.5 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.4 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.5 +0.6 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 +0.2 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.7 +0.1 +1.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.3 +0.4 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.3 +0.4 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.5 +0.2 +1.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.2 +1.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 -0.1 +2.2 N.D.
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