Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8945 and 8946 are separated by 328 nucleotides8946 and 8947 are separated by 238 nucleotides8947 and 8948 are separated by 201 nucleotides8948 and 8949 are separated by 430 nucleotides mRNA_577: 8945 - Hypothetical Protein, at 1,382,684 to 1,384,433 8945 mRNA_578: 8946 - K05687 PARK7 protein DJ-1, at 1,384,762 to 1,386,533 8946 mRNA_579: 8947 - K10686 UBE1C, UBA3 ubiquitin-activating enzyme E1 C, at 1,386,772 to 1,388,532 8947 mRNA_580: 8948 - Hypothetical Protein, at 1,388,734 to 1,389,540 8948 mRNA_581: 8949 - Interpro ERCC4 domain 0, at 1,389,971 to 1,392,481 8949
Group Condition mRNA_577 mRNA_578 mRNA_579 mRNA_580 mRNA_581
8945 8946 8947 8948 8949
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -2.6 N.D. -0.3 +1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.3 N.D. +0.1 -0.7
growth on oleic acid YNB Glucose +0.1 -0.2 N.D. -0.3 -0.3
growth on ypd YPD -0.1 -0.6 N.D. -0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 N.D. -0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.4 N.D. -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.4 N.D. +0.0 +0.2
growth on oleic acid YNB Oleic Acid +0.4 +0.1 N.D. -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.3 N.D. +0.1 +0.4
growth on ricinoleic acid YNB Glucose +0.4 -0.1 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +1.2 N.D. -0.1 -0.7
auxotrophy YNB Glucose +0.5 -0.1 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 N.D. +0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.3 N.D. +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.3 N.D. +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +1.5 N.D. -0.2 -0.6
auxotrophy Dropout Complete +0.6 -0.2 N.D. +0.0 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.6 N.D. -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.4 N.D. +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +1.7 N.D. -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +2.2 N.D. -0.3 -0.4
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