Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8946 and 8947 are separated by 238 nucleotides8947 and 8948 are separated by 201 nucleotides8948 and 8949 are separated by 430 nucleotides8949 and 8950 are separated by 116 nucleotides mRNA_578: 8946 - K05687 PARK7 protein DJ-1, at 1,384,762 to 1,386,533 8946 mRNA_579: 8947 - K10686 UBE1C, UBA3 ubiquitin-activating enzyme E1 C, at 1,386,772 to 1,388,532 8947 mRNA_580: 8948 - Hypothetical Protein, at 1,388,734 to 1,389,540 8948 mRNA_581: 8949 - Interpro ERCC4 domain 0, at 1,389,971 to 1,392,481 8949 mRNA_582: 8950 - K02876 RP-L15, MRPL15, rplO large subunit ribosomal protein L15, at 1,392,598 to 1,393,775 8950
Group Condition mRNA_578 mRNA_579 mRNA_580 mRNA_581 mRNA_582
8946 8947 8948 8949 8950
ypd buoyancy 40 hrs No Buoyancy Separation -2.6 N.D. -0.3 +1.0 N.D.
growth on oleic acid YNB Glucose -0.2 N.D. -0.3 -0.3 N.D.
growth on ypd YPD -0.6 N.D. -0.2 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.1 -0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. +0.1 -0.7 N.D.
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.1 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. -0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. +0.0 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. +0.1 +0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.1 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.1 -0.2 N.D.
auxotrophy YNB Glucose -0.1 N.D. +0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. +0.1 -0.3 N.D.
auxotrophy Dropout Complete -0.2 N.D. +0.0 +0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.3 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.2 N.D. -0.1 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.5 N.D. -0.2 -0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.6 N.D. -0.0 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 N.D. +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.7 N.D. -0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +2.2 N.D. -0.3 -0.4 N.D.
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